Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Zmays_GRMZM2G060672 GRMZM2G060672 |
5 | 82294604 | 82295765 | Phytozome | 6a | Zea_mays | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Zmays_GRMZM2G060672_T01 GRMZM2G060672_T01 PAC:30986725 |
Low | No | 1162 | Get ORF Coding potential... Type: noncoding Potential: -1.333 Folding energies... MFEI: -30.947 AMFE: -0.653 GC content %: 47.418 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Zmays_GRMZM2G060672_T01 | RepBase (RepeatMasker) | 2014-01-31 | PREM1A_ZM_LTR |