Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Zmays_GRMZM2G116517 GRMZM2G116517 |
7 | 116399077 | 116402985 | Phytozome | 6a | Zea_mays | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Zmays_GRMZM2G116517_T06 GRMZM2G116517_T06 PAC:30998417 |
Low | No | 760 | Get ORF Coding potential... Type: noncoding Potential: -1.190 Folding energies... MFEI: -28.145 AMFE: -0.615 GC content %: 45.789 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Zmays_GRMZM2G116517_T06 | RepBase (RepeatMasker) | 2014-01-31 | DNA-7_ZM |