Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Zmays_GRMZM2G172723 GRMZM2G172723 |
1 | 189434018 | 189436303 | Phytozome | 6a | Zea_mays | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Zmays_GRMZM2G172723_T05 GRMZM2G172723_T05 PAC:31013973 |
Low | No | 1159 | Get ORF Coding potential... Type: noncoding Potential: -0.810 Folding energies... MFEI: -35.073 AMFE: -0.632 GC content %: 55.479 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Zmays_GRMZM2G172723_T05 | SwissProt | 2015-06-01 | Q9S720 | 9.0e-7 |