Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Zmays_GRMZM2G181218 GRMZM2G181218 |
1 | 74615641 | 74617107 | Phytozome | 6a | Zea_mays | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Zmays_GRMZM2G181218_T01 GRMZM2G181218_T01 PAC:31010958 |
Low | No | 1467 | Get ORF Coding potential... Type: noncoding Potential: -1.171 Folding energies... MFEI: -20.988 AMFE: -0.580 GC content %: 36.196 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Zmays_GRMZM2G181218_T01 | SwissProt | 2015-06-01 | A1E9S8 | 1.0e-32 |
Zmays_GRMZM2G181218_T01 | RepBase (RepeatMasker) | 2014-01-31 | hAT-14N2_ZM |