Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Zmays_GRMZM5G842848 GRMZM5G842848 |
3 | 17614547 | 17614958 | Phytozome | 6a | Zea_mays | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Zmays_GRMZM5G842848_T01 GRMZM5G842848_T01 PAC:31036274 |
Low | Yes | 412 | Get ORF Coding potential... Type: noncoding Potential: -1.109 Folding energies... MFEI: -34.369 AMFE: -0.734 GC content %: 46.845 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Zmays_GRMZM5G842848_T01 | RepBase (RepeatMasker) | 2014-01-31 | Helitron-3_ZM |