Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Zmays_GRMZM5G860022 GRMZM5G860022 |
1 | 81589455 | 81589685 | Phytozome | 6a | Zea_mays | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Zmays_GRMZM5G860022_T01 GRMZM5G860022_T01 PAC:31017574 |
Low | No | 231 | Get ORF Coding potential... Type: noncoding Potential: -0.883 Folding energies... MFEI: -35.108 AMFE: -0.530 GC content %: 66.234 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Zmays_GRMZM5G860022_T01 | SwissProt | 2015-06-01 | Q06398 | 5.0e-12 |