Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Zmays_GRMZM5G894296 GRMZM5G894296 |
3 | 189262008 | 189262960 | Phytozome | 6a | Zea_mays | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Zmays_GRMZM5G894296_T01 GRMZM5G894296_T01 PAC:31036259 |
Low | Yes | 953 | Get ORF Coding potential... Type: noncoding Potential: -1.175 Folding energies... MFEI: -29.601 AMFE: -0.662 GC content %: 44.701 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Zmays_GRMZM5G894296_T01 | Rfam | 11.0 | mir-399 | 1.1e-12 |