| Gene alias | Chrom. | Start | End | Num. of lncRNAs |
|---|---|---|---|---|
| Alyrata AL1G18570 | scaffold_1 | 3065740 | 3066224 | 1 |
| Alyrata AL1G19460 | scaffold_1 | 3436591 | 3436793 | 1 |
| Alyrata AL1G19840 | scaffold_1 | 3571155 | 3572786 | 1 |
| Alyrata AL1G19870 | scaffold_1 | 3576380 | 3576920 | 1 |
| Alyrata AL1G20160 | scaffold_1 | 3668460 | 3668890 | 1 |
| Alyrata AL1G20190 | scaffold_1 | 3674185 | 3675659 | 1 |
| Alyrata AL1G20360 | scaffold_1 | 3726674 | 3727222 | 1 |
| Alyrata AL1G20600 | scaffold_1 | 3811453 | 3812782 | 1 |
| Alyrata AL1G20772 | scaffold_1 | 3881244 | 3881496 | 1 |
| Alyrata AL1G20980 | scaffold_1 | 3976164 | 3977022 | 1 |
| Alyrata AL1G21270 | scaffold_1 | 4080408 | 4081492 | 1 |
| Alyrata AL1G21420 | scaffold_1 | 4142997 | 4144573 | 1 |
| Alyrata AL1G21510 | scaffold_1 | 4180915 | 4182705 | 1 |
| Alyrata AL1G21670 | scaffold_1 | 4251585 | 4259246 | 1 |
| Alyrata AL1G21800 | scaffold_1 | 4304163 | 4305830 | 1 |
| Alyrata AL1G21850 | scaffold_1 | 4323895 | 4326976 | 3 |
| Alyrata AL1G21860 | scaffold_1 | 4327926 | 4331340 | 2 |
| Alyrata AL1G22100 | scaffold_1 | 4422989 | 4423587 | 1 |
| Alyrata AL1G22210 | scaffold_1 | 4466122 | 4466578 | 1 |
| Alyrata AL1G22340 | scaffold_1 | 4516336 | 4517310 | 1 |
| Alyrata AL1G22680 | scaffold_1 | 4621996 | 4622344 | 1 |
| Alyrata AL1G22700 | scaffold_1 | 4633798 | 4635251 | 1 |
| Alyrata AL1G22790 | scaffold_1 | 4673436 | 4674100 | 1 |
| Alyrata AL1G22870 | scaffold_1 | 4715349 | 4716593 | 1 |
| Alyrata AL1G22890 | scaffold_1 | 4719741 | 4720473 | 1 |
| Alyrata AL1G23020 | scaffold_1 | 4755448 | 4756042 | 1 |
| Alyrata AL1G23240 | scaffold_1 | 4839654 | 4840193 | 1 |
| Alyrata AL1G23320 | scaffold_1 | 4873924 | 4874523 | 1 |
| Alyrata AL1G23370 | scaffold_1 | 4895250 | 4895723 | 1 |
| Alyrata AL1G23450 | scaffold_1 | 4932248 | 4932976 | 1 |
| Alyrata AL1G23490 | scaffold_1 | 4948783 | 4949493 | 1 |
| Alyrata AL1G23560 | scaffold_1 | 4979698 | 4980697 | 1 |
| Alyrata AL1G23700 | scaffold_1 | 5028638 | 5029167 | 1 |
| Alyrata AL1G23760 | scaffold_1 | 5049724 | 5049954 | 1 |
| Alyrata AL1G23800 | scaffold_1 | 5065836 | 5068759 | 2 |
| Alyrata AL1G24000 | scaffold_1 | 5144354 | 5144949 | 1 |
| Alyrata AL1G24150 | scaffold_1 | 5204814 | 5205558 | 1 |
| Alyrata AL1G24270 | scaffold_1 | 5240685 | 5241413 | 1 |
| Alyrata AL1G24410 | scaffold_1 | 5304668 | 5306992 | 1 |
| Alyrata AL1G24440 | scaffold_1 | 5314828 | 5315277 | 1 |
| Alyrata AL1G24820 | scaffold_1 | 5461182 | 5461690 | 1 |
| Alyrata AL1G24940 | scaffold_1 | 5508991 | 5509557 | 1 |
| Alyrata AL1G24994 | scaffold_1 | 5539923 | 5540126 | 1 |
| Alyrata AL1G25050 | scaffold_1 | 5570375 | 5573367 | 1 |
| Alyrata AL1G25140 | scaffold_1 | 5623656 | 5624036 | 1 |
| Alyrata AL1G25640 | scaffold_1 | 5813844 | 5814834 | 1 |
| Alyrata AL1G26350 | scaffold_1 | 6084034 | 6084512 | 1 |
| Alyrata AL1G26380 | scaffold_1 | 6093357 | 6094128 | 1 |
| Alyrata AL1G26460 | scaffold_1 | 6127869 | 6129172 | 2 |
| Alyrata AL1G26620 | scaffold_1 | 6194839 | 6196193 | 1 |