| Gene alias | Chrom. | Start | End | Num. of lncRNAs |
|---|---|---|---|---|
| Osativa LOC Os01g08870 | Chr1 | 4453717 | 4454004 | 1 |
| Osativa LOC Os01g09270 | Chr1 | 4713523 | 4713924 | 1 |
| Osativa LOC Os01g09350 | Chr1 | 4758725 | 4758988 | 1 |
| Osativa LOC Os01g09410 | Chr1 | 4791837 | 4795348 | 1 |
| Osativa LOC Os01g09480 | Chr1 | 4837004 | 4838215 | 1 |
| Osativa LOC Os01g09940 | Chr1 | 5171227 | 5171814 | 1 |
| Osativa LOC Os01g10030 | Chr1 | 5227044 | 5229966 | 1 |
| Osativa LOC Os01g10060 | Chr1 | 5251888 | 5253124 | 1 |
| Osativa LOC Os01g10170 | Chr1 | 5339444 | 5339729 | 1 |
| Osativa LOC Os01g10400 | Chr1 | 5478476 | 5479836 | 2 |
| Osativa LOC Os01g10550 | Chr1 | 5600028 | 5600869 | 1 |
| Osativa LOC Os01g10660 | Chr1 | 5693664 | 5693990 | 1 |
| Osativa LOC Os01g10670 | Chr1 | 5695273 | 5695584 | 1 |
| Osativa LOC Os01g10760 | Chr1 | 5750703 | 5751035 | 1 |
| Osativa LOC Os01g11190 | Chr1 | 5994786 | 5995455 | 1 |
| Osativa LOC Os01g11400 | Chr1 | 6132290 | 6132533 | 1 |
| Osativa LOC Os01g11470 | Chr1 | 6182163 | 6182516 | 1 |
| Osativa LOC Os01g11600 | Chr1 | 6257915 | 6258264 | 1 |
| Osativa LOC Os01g11640 | Chr1 | 6277478 | 6277714 | 1 |
| Osativa LOC Os01g11690 | Chr1 | 6303562 | 6303822 | 1 |
| Osativa LOC Os01g12010 | Chr1 | 6537654 | 6537896 | 1 |
| Osativa LOC Os01g12100 | Chr1 | 6587146 | 6587940 | 1 |
| Osativa LOC Os01g12110 | Chr1 | 6590899 | 6592136 | 2 |
| Osativa LOC Os01g12120 | Chr1 | 6606521 | 6607239 | 1 |
| Osativa LOC Os01g12190 | Chr1 | 6649789 | 6650522 | 1 |
| Osativa LOC Os01g12270 | Chr1 | 6704403 | 6704666 | 1 |
| Osativa LOC Os01g12510 | Chr1 | 6875888 | 6876100 | 1 |
| Osativa LOC Os01g12850 | Chr1 | 7111153 | 7111440 | 1 |
| Osativa LOC Os01g13010 | Chr1 | 7236012 | 7236450 | 1 |
| Osativa LOC Os01g13285 | Chr1 | 7414865 | 7415354 | 1 |
| Osativa LOC Os01g13330 | Chr1 | 7431934 | 7433002 | 1 |
| Osativa LOC Os01g13500 | Chr1 | 7528649 | 7530136 | 1 |
| Osativa LOC Os01g13510 | Chr1 | 7543671 | 7544510 | 1 |
| Osativa LOC Os01g13670 | Chr1 | 7657718 | 7658062 | 1 |
| Osativa LOC Os01g13680 | Chr1 | 7661046 | 7661285 | 1 |
| Osativa LOC Os01g13720 | Chr1 | 7677147 | 7678869 | 4 |
| Osativa LOC Os01g14120 | Chr1 | 7924395 | 7924787 | 1 |
| Osativa LOC Os01g14240 | Chr1 | 7984719 | 7984946 | 1 |
| Osativa LOC Os01g14360 | Chr1 | 8040956 | 8041210 | 1 |
| Osativa LOC Os01g14380 | Chr1 | 8057723 | 8057935 | 1 |
| Osativa LOC Os01g14750 | Chr1 | 8242626 | 8242898 | 1 |
| Osativa LOC Os01g14790 | Chr1 | 8269588 | 8272646 | 1 |
| Osativa LOC Os01g14880 | Chr1 | 8339182 | 8339424 | 1 |
| Osativa LOC Os01g15029 | Chr1 | 8444463 | 8447054 | 1 |
| Osativa LOC Os01g15080 | Chr1 | 8457959 | 8458710 | 1 |
| Osativa LOC Os01g15290 | Chr1 | 8555286 | 8557176 | 2 |
| Osativa LOC Os01g15399 | Chr1 | 8630317 | 8633592 | 2 |
| Osativa LOC Os01g15410 | Chr1 | 8636482 | 8637032 | 1 |
| Osativa LOC Os01g15448 | Chr1 | 8657064 | 8658466 | 1 |
| Osativa LOC Os01g15610 | Chr1 | 8770874 | 8773267 | 1 |